BMC Genomics / Sep 08, 2014

Nimmakayala, P., Levi, A., Abburi, L., Abburi, V. L., Tomason, Y. R., Saminathan, T., Vajja, V. G., Malkaram, S., Reddy, R., Wehner, T. C., Mitchell, S. E., & Reddy, U. K. (2014). Single nucleotide polymorphisms generated by genotyping by sequencing to characterize genome-wide diversity, linkage disequilibrium, and selective sweeps in cultivated watermelon. BMC Genomics, 15(1). https://doi.org/10.1186/1471-2164-15-767

New Phytologist / Nov 16, 2010

Thangasamy, S., Guo, C., Chuang, M., Lai, M., Chen, J., & Jauh, G. (2010). Rice SIZ1, a SUMO E3 ligase, controls spikelet fertility through regulation of anther dehiscence. New Phytologist, 189(3), 869–882. Portico. https://doi.org/10.1111/j.1469-8137.2010.03538.x

Frontiers in Plant Science / Jan 19, 2018

Saminathan, T., García, M., Ghimire, B., Lopez, C., Bodunrin, A., Nimmakayala, P., Abburi, V. L., Levi, A., Balagurusamy, N., & Reddy, U. K. (2018). Metagenomic and Metatranscriptomic Analyses of Diverse Watermelon Cultivars Reveal the Role of Fruit Associated Microbiome in Carbohydrate Metabolism and Ripening of Mature Fruits. Frontiers in Plant Science, 9. https://doi.org/10.3389/fpls.2018.00004

BMC Plant Biology / May 26, 2016

Saminathan, T., Bodunrin, A., Singh, N. V., Devarajan, R., Nimmakayala, P., Jeff, M., Aradhya, M., & Reddy, U. K. (2016). Genome-wide identification of microRNAs in pomegranate (Punica granatum L.) by high-throughput sequencing. BMC Plant Biology, 16(1). https://doi.org/10.1186/s12870-016-0807-3

Scientific Reports / Nov 30, 2016

Nimmakayala, P., Abburi, V. L., Saminathan, T., Alaparthi, S. B., Almeida, A., Davenport, B., Nadimi, M., Davidson, J., Tonapi, K., Yadav, L., Malkaram, S., Vajja, G., Hankins, G., Harris, R., Park, M., Choi, D., Stommel, J., & Reddy, U. K. (2016). Genome-wide Diversity and Association Mapping for Capsaicinoids and Fruit Weight in Capsicum annuum L. Scientific Reports, 6(1). https://doi.org/10.1038/srep38081

Journal of Experimental Botany / Dec 17, 2014

Saminathan, T., Nimmakayala, P., Manohar, S., Malkaram, S., Almeida, A., Cantrell, R., Tomason, Y., Abburi, L., Rahman, M. A., Vajja, V. G., Khachane, A., Kumar, B., Rajasimha, H. K., Levi, A., Wehner, T., & Reddy, U. K. (2014). Differential gene expression and alternative splicing between diploid and tetraploid watermelon. Journal of Experimental Botany, 66(5), 1369–1385. https://doi.org/10.1093/jxb/eru486

Molecular Genetics and Genomics / Feb 13, 2015

Singh, N. V., Abburi, V. L., Ramajayam, D., Kumar, R., Chandra, R., Sharma, K. K., Sharma, J., Babu, K. D., Pal, R. K., Mundewadikar, D. M., Saminathan, T., Cantrell, R., Nimmakayala, P., & Reddy, U. K. (2015). Genetic diversity and association mapping of bacterial blight and other horticulturally important traits with microsatellite markers in pomegranate from India. Molecular Genetics and Genomics, 290(4), 1393–1402. https://doi.org/10.1007/s00438-015-1003-0

Frontiers in Plant Science / Sep 22, 2016

Nimmakayala, P., Tomason, Y. R., Abburi, V. L., Alvarado, A., Saminathan, T., Vajja, V. G., Salazar, G., Panicker, G. K., Levi, A., Wechter, W. P., McCreight, J. D., Korol, A. B., Ronin, Y., Garcia-Mas, J., & Reddy, U. K. (2016). Genome-Wide Differentiation of Various Melon Horticultural Groups for Use in GWAS for Fruit Firmness and Construction of a High Resolution Genetic Map. Frontiers in Plant Science, 7. https://doi.org/10.3389/fpls.2016.01437

G3 Genes|Genomes|Genetics / Nov 01, 2014

Reddy, U. K., Nimmakayala, P., Levi, A., Abburi, V. L., Saminathan, T., Tomason, Y. R., Vajja, G., Reddy, R., Abburi, L., Wehner, T. C., Ronin, Y., & Karol, A. (2014). High-Resolution Genetic Map for Understanding the Effect of Genome-Wide Recombination Rate on Nucleotide Diversity in Watermelon. G3 Genes|Genomes|Genetics, 4(11), 2219–2230. https://doi.org/10.1534/g3.114.012815

PLOS ONE / Apr 30, 2019

Lopez-Ortiz, C., Dutta, S. K., Natarajan, P., Peña-Garcia, Y., Abburi, V., Saminathan, T., Nimmakayala, P., & Reddy, U. K. (2019). Genome-wide identification and gene expression pattern of ABC transporter gene family in Capsicum spp. PLOS ONE, 14(4), e0215901. https://doi.org/10.1371/journal.pone.0215901

Journal of Heredity / Nov 25, 2014

Reddy, U. K., Abburi, L., Abburi, V. L., Saminathan, T., Cantrell, R., Vajja, V. G., Reddy, R., Tomason, Y. R., Levi, A., Wehner, T. C., & Nimmakayala, P. (2014). A Genome-Wide Scan of Selective Sweeps and Association Mapping of Fruit Traits Using Microsatellite Markers in Watermelon. Journal of Heredity, 106(2), 166–176. https://doi.org/10.1093/jhered/esu077

The Plant Journal / May 25, 2012

Thangasamy, S., Chen, P., Lai, M., Chen, J., & Jauh, G. (2012). Rice LGD1 containing RNA binding activity affects growth and development through alternative promoters. The Plant Journal, 71(2), 288–302. Portico. https://doi.org/10.1111/j.1365-313x.2012.04989.x

Frontiers in Plant Science / Nov 03, 2016

Nimmakayala, P., Abburi, V. L., Saminathan, T., Almeida, A., Davenport, B., Davidson, J., Reddy, C. V. C. M., Hankins, G., Ebert, A., Choi, D., Stommel, J., & Reddy, U. K. (2016). Genome-Wide Divergence and Linkage Disequilibrium Analyses for Capsicum baccatum Revealed by Genome-Anchored Single Nucleotide Polymorphisms. Frontiers in Plant Science, 7. https://doi.org/10.3389/fpls.2016.01646

Functional & Integrative Genomics / Sep 22, 2018

Saminathan, T., Alvarado, A., Lopez, C., Shinde, S., Gajanayake, B., Abburi, V. L., Vajja, V. G., Jagadeeswaran, G., Raja Reddy, K., Nimmakayala, P., & Reddy, U. K. (2018). Elevated carbon dioxide and drought modulate physiology and storage-root development in sweet potato by regulating microRNAs. Functional & Integrative Genomics, 19(1), 171–190. https://doi.org/10.1007/s10142-018-0635-7

Environmental Science & Technology / Aug 13, 2015

Saminathan, T., Malkaram, S. A., Patel, D., Taylor, K., Hass, A., Nimmakayala, P., Huber, D. H., & Reddy, U. K. (2015). Transcriptome Analysis of Invasive Plants in Response to Mineral Toxicity of Reclaimed Coal-Mine Soil in the Appalachian Region. Environmental Science & Technology, 49(17), 10320–10329. https://doi.org/10.1021/acs.est.5b01901

Scientia Horticulturae / Jan 01, 2014

Sivankalyani, V., Takumi, S., Thangasamy, S., Ashakiran, K., & Girija, S. (2014). Punctured-hypocotyl method for high-efficient transformation and adventitious shoot regeneration of tomato. Scientia Horticulturae, 165, 357–364. https://doi.org/10.1016/j.scienta.2013.11.034

Journal of Hazardous Materials / Apr 01, 2021

Peña-Garcia, Y., Shinde, S., Natarajan, P., Lopez-Ortiz, C., Balagurusamy, N., Chavez, A. C. D., Saminathan, T., Nimmakayala, P., & Reddy, U. K. (2021). Arsenic Stress-Related F-Box (ASRF) gene regulates arsenic stress tolerance in Arabidopsis thaliana. Journal of Hazardous Materials, 407, 124831. https://doi.org/10.1016/j.jhazmat.2020.124831

Scientific Reports / Jan 27, 2017

Reddy, U. K., Nimmakayala, P., Abburi, V. L., Reddy, C. V. C. M., Saminathan, T., Percy, R. G., Yu, J. Z., Frelichowski, J., Udall, J. A., Page, J. T., Zhang, D., Shehzad, T., & Paterson, A. H. (2017). Genome-wide divergence, haplotype distribution and population demographic histories for Gossypium hirsutum and Gossypium barbadense as revealed by genome-anchored SNPs. Scientific Reports, 7(1). https://doi.org/10.1038/srep41285

Crop variety improvement and its effect on productivity: the impact of international agricultural research / Jan 01, 2003

Bantilan, M. C. S., & Deb, U. K. (2003). Impacts of genetic enhancement in pearl millet. In Crop variety improvement and its effect on productivity: the impact of international agricultural research (pp. 215–240). CABI Publishing. https://doi.org/10.1079/9780851995496.0215

Genetics and Genomics of Cucurbitaceae / Jan 01, 2017

Nimmakayala, P., Saminathan, T., Abburi, V. L., Yadav, L. K., Tomason, Y., Levi, A., Weng, Y., & Reddy, U. K. (2017). Comparative Genomics of the Cucurbitaceae. In Plant Genetics and Genomics: Crops and Models (pp. 229–240). Springer International Publishing. https://doi.org/10.1007/7397_2017_2

Plants / Jan 20, 2021

Ghimire, B., Saminathan, T., Bodunrin, A., Abburi, V. L., Kshetry, A. O., Shinde, S., Nimmakayala, P., & Reddy, U. K. (2021). Genome-Wide Association Study of Natural Variation in Arabidopsis Exposed to Acid Mine Drainage Toxicity and Validation of Associated Genes with Reverse Genetics. Plants, 10(2), 191. https://doi.org/10.3390/plants10020191

Indian Journal of Horticulture / Jan 01, 2015

Singh, N. V., Saminathan, T., Chandra, R., Awachare, C., Babu, K. D., Mundewadikar, D. M., & Pal, R. K. (2015). RNA isolation from high polyphenol containing tissues of pomegranate. Indian Journal of Horticulture, 72(2), 273. https://doi.org/10.5958/0974-0112.2015.00051.1

Diversity / Sep 01, 2021

Perry, Z. D., Saminathan, T., Arun, A., Vaidya, B. N., Basu, C., Reddy, U. K., & Joshee, N. (2021). Transcriptome Analysis of Cambium Tissue of Paulownia Collected during Winter and Spring. Diversity, 13(9), 423. https://doi.org/10.3390/d13090423

Sustainable Rice Production - Challenges, Strategies and Opportunities / Oct 04, 2023

Watanabe, S. (2023). The Potential Health Benefits of Brown Rice. In Sustainable Rice Production - Challenges, Strategies and Opportunities. IntechOpen. https://doi.org/10.5772/intechopen.107543

Environmental and Experimental Botany / Sep 01, 2022

Pacheco-Valenciana, A., Lopez-Ortiz, C., Natarajan, P., Saminathan, T., Nimmakayala, P., & Reddy, U. K. (2022). Stress responses and comparative transcriptome analysis of Arabidopsis thaliana ecotypes exposed to BTEX compounds. Environmental and Experimental Botany, 201, 104953. https://doi.org/10.1016/j.envexpbot.2022.104953

Scientific Reports / Mar 04, 2020

Lopez-Ortiz, C., Peña-Garcia, Y., Natarajan, P., Bhandari, M., Abburi, V., Dutta, S. K., Yadav, L., Stommel, J., Nimmakayala, P., & Reddy, U. K. (2020). The ankyrin repeat gene family in Capsicum spp: Genome-wide survey, characterization and gene expression profile. Scientific Reports, 10(1). https://doi.org/10.1038/s41598-020-61057-4

BIO-PROTOCOL / Jan 01, 2013

Thangasamy, S., & Jauh, G.-Y. (2013). Northwestern Blot of Protein-RNA Interaction from Young Rice Panicles. BIO-PROTOCOL, 3(7). https://doi.org/10.21769/bioprotoc.625

Chromosome Engineering in Plants: Genetics, Breeding, Evolution, Part A / Jan 01, 1991

HANNA, W. W. (1991). Apomixis in Crop Plants—Cytogenetic Basis and Role in Plant Breeding. In Developments in Plant Genetics and Breeding (pp. 229–242). Elsevier. https://doi.org/10.1016/b978-0-444-88259-2.50015-1

Sugar Tech / Sep 01, 2003

Hemaprabha, G., Natarajan, U. S., & Balasundaram, N. (2003). Breeding behaviour for juice quality through selfing and progeny evaluation in hybrid clones and inbred derivatives of sugarcane (Saccharum sp.). Sugar Tech, 5(3), 177–180. https://doi.org/10.1007/bf02943631