Work with thought leaders and academic experts in microbiology

Companies can greatly benefit from working with experts in the field of Microbiology. These researchers bring a wealth of knowledge and skills that can contribute to various aspects of a company's operations. Here are some ways companies can collaborate with academic researchers in Microbiology: 1. Research and Development: Academic researchers can assist in conducting research and developing new products or technologies related to Microbiology. Their expertise can help companies stay at the forefront of scientific advancements. 2. Quality Control: Microbiology experts can ensure the quality and safety of products by conducting rigorous testing and analysis. They can help identify and mitigate potential risks associated with microbial contamination. 3. Disease Prevention and Control: Collaborating with Microbiology researchers can help companies develop strategies to prevent and control the spread of infectious diseases. This can be particularly valuable for industries such as healthcare, food production, and pharmaceuticals. 4. Environmental Impact Assessment: Microbiology researchers can assess the environmental impact of industrial processes and develop sustainable solutions. They can help companies minimize their ecological footprint and comply with environmental regulations. 5. Training and Education: Academic researchers can provide training and education programs to company employees, enhancing their understanding of Microbiology and its applications. This can improve overall efficiency and productivity within the organization.

Researchers on NotedSource with backgrounds in microbiology include Garrett A. Perchetti, Research Scientist - Virology, Maite DiLorenzo, Sarafa A. Akeem, Michael W Harman, Ajay Badhan, Jeffrey Townsend, Dr. Justin Whalley, Ph.D, Maurice O'Sullivan, Francisco JRC Coelho, Ariel Aptekmann, Carissa Pardamean, PhD, Adedayo Oyedele Ph.D., Tiffany Halvorsen, Valentina Méndez, Ganna Galitska, and Dr. David Siderovski, Ph.D..

Garrett A. Perchetti, Research Scientist - Virology

New York
Research Scientist and MD Candidate in virology with publications on infectious diseases, laboratory medicine, viral genetics, and clinical medicine
Most Relevant Research Interests
Microbiology
Other Research Interests (14)
Virology
Infectious Diseases
SARS-CoV-2
COVID-19
Microbiology (medical)
And 9 more
About
Garrett A. Perchetti is a highly accomplished research scientist in the field of virology. He received a Bachelor of Science in Microbiology and a Bachelor of Arts in Art History from the University of Washington. His interest in both science and the arts led him to pursue a career in virology, where he could combine his passion for understanding the natural world with his creative thinking skills. After completing his undergraduate studies, Garrett continued his education by earning a Medical Degree from Ross University School of Medicine in 2025. During his time in medical school, he developed a keen interest in virology and infectious diseases, which ultimately led him to specialize in this field. Garrett's educational background is complemented by his extensive experience as a research scientist. He has worked at the University of Washington School of Medicine, where he has conducted groundbreaking research on various types of viruses. His work has been published in numerous scientific journals, and he has presented his findings at international conferences. Garrett's contributions to the field of virology have been widely recognized, and he has received several awards and accolades for his work. He is known for his meticulous attention to detail, innovative thinking, and ability to collaborate effectively with other researchers. In his free time, Garrett enjoys painting, hiking, and traveling. He is also passionate about raising awareness about the importance of vaccinations and promoting public health initiatives. With his exceptional education and extensive experience, Garrett A. Perchetti is a valuable asset to the field of virology and will continue to make significant contributions in the future.

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Maite DiLorenzo

Cary, North Carolina, United States of America
Ph.D. Professor, Microbiome Researcher & Molecular Biologist
Most Relevant Research Interests
Microbiology
Other Research Interests (7)
Molecular genetics
Environmental microbiology
Marine biology
Host-microbe interactions
Bioinformatics
And 2 more
About
PROFESSIONAL SUMMARY PhD level molecular biologist with over 10 years of work experience in qualitative, quantitative, and investigational microbiome research within academia and government agencies. Maintains broad knowledge of state-of-the-art principles and theory with significant laboratory expertise and great ability to mentor others. Strong organizational, analytical, troubleshooting, and problem-solving skills. Quick learner and able to understand complex topics. Self-motivated with a great work ethic and works well independently under minimum supervision. Superior collaborative and teamwork skills. Excellent written and verbal communication, with a keen eye for detail. Bilingual: English and Portuguese. SKILLS Molecular biology (i.e., DNA extraction, purification, primer design, PCR, qPCR, gel electrophoresis, next generation sequencing, bioinformatics, microbiome analysis, R/RStudio), microbiology (i.e., aseptic technique, culturing, selective plating, plate reading, membrane filtration, BSL2, flow cytometry, environmental monitoring), molecular genetics (i.e., cloning, transformations, gene editing), scientific communication (formal and informal), critical thinking, public speaking, mentorship, Microsoft Office & Google Suite, organization, time-management, flexible, forward-thinking, and motivated.

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Sarafa A. Akeem

Benin City
Lecturer and Food Researcher with fifteen peer-reviewed publications in international journal outlets.
Most Relevant Research Interests
Microbiology
Other Research Interests (12)
Food Processing and preservation
Food Chemistry and Nutrition
Food Product Development
Food Quality Control
Food Safety
And 7 more
About
Sarafa Adeyemi Akeem is an innovative, creative, highly motivated and result-oriented Food Researcher that is open to job opportunities as well as open to both national and international collaborations in the various areas of Food Chemistry/ biochemistry, Processing, Preservation, Process Engineering, Analysis, Quality Control, Safety, Product Development, Post Harvest Technology and Nutrition with the overall aim of contributing to the global food and nutrition security.
Most Relevant Publications (2+)

11 total publications

INFLUENCE OF PARTIAL SUBSTITUTION OF SUGAR WITH SERENDIPITY BERRY (DIOSCOREOPHYLLUM CUMMINSII) EXTRACT ON THE QUALITY ATTRIBUTES AND SHELF-LIFE OF WHEAT BREAD

Journal of microbiology, biotechnology and food sciences / Aug 01, 2019

Monday Ojo Kayode, R., Adunni Abiodun, O., Adeyemi Akeem, S., & Omodasola Oyeneye, H. (2019). INFLUENCE OF PARTIAL SUBSTITUTION OF SUGAR WITH SERENDIPITY BERRY (DIOSCOREOPHYLLUM CUMMINSII) EXTRACT ON THE QUALITY ATTRIBUTES AND SHELF-LIFE OF WHEAT BREAD. Journal of Microbiology, Biotechnology and Food Sciences, 9(1), 115–120. https://doi.org/10.15414/jmbfs.2019.9.1.115-120

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Michael W Harman

East Greenwich, RI, Rhode Island, United States of America
Distinguished Subject Matter Expert & Leader in Medical Technologies.
Most Relevant Research Interests
Microbiology
Other Research Interests (13)
Bacteria & Cell Bio-Physics
Biomechanics
Infectious Diseases
Immunology
Parasitology
And 8 more
About
Highly skilled, energetic, and motivated professional empowered by over a decade of cross-disciplinary engineering and scientific applications experience. Presenting elegant solutions to prevalent biomedical challenges. Motivated by driving deliverable outcomes from complex research studies through effective leadership, active consulting work, and innovative problem-solving techniques. Seeking to make an immediate impact in a fast-paced biotechnology environment capitalizing on my advanced comprehension, continued professional growth, strategic product development expertise, and active network of personal connections across all areas of science, engineering, medicine, manufacturing and healthcare.
Most Relevant Publications (1+)

15 total publications

The Hybrid Histidine Kinase Hk1 Is Part of a Two-Component System That Is Essential for Survival of Borrelia burgdorferi in Feeding Ixodes scapularis Ticks

Infection and Immunity / Aug 01, 2011

Caimano, M. J., Kenedy, M. R., Kairu, T., Desrosiers, D. C., Harman, M., Dunham-Ems, S., Akins, D. R., Pal, U., & Radolf, J. D. (2011). The Hybrid Histidine Kinase Hk1 Is Part of a Two-Component System That Is Essential for Survival of Borrelia burgdorferi in Feeding Ixodes scapularis Ticks. Infection and Immunity, 79(8), 3117–3130. https://doi.org/10.1128/iai.05136-11

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Jeffrey Townsend

New Haven, CT
Professor of Biostatistics and Ecology & Evolutionary Biology
Most Relevant Research Interests
Microbiology
Other Research Interests (52)
Evolutionary Genomics
Infectious Diseases
Genetics
Cell Biology
Ecology, Evolution, Behavior and Systematics
And 47 more
About
Jeffrey Townsend is a Professor of Organismic and Evolutionary Biology at Yale University. He received his Ph.D. from Harvard University in 2002 and his Sc.B. from Brown University in 1994. He has been a teacher at St. Ann's School and an Assistant Professor at the University of Connecticut. He is currently the Elihu Professor of Biostatistics at Yale University.
Most Relevant Publications (26+)

207 total publications

Horizontal gene transfer, genome innovation and evolution

Nature Reviews Microbiology / Aug 01, 2005

Gogarten, J. P., & Townsend, J. P. (2005). Horizontal gene transfer, genome innovation and evolution. Nature Reviews Microbiology, 3(9), 679–687. https://doi.org/10.1038/nrmicro1204

The durability of immunity against reinfection by SARS-CoV-2: a comparative evolutionary study

The Lancet Microbe / Dec 01, 2021

Townsend, J. P., Hassler, H. B., Wang, Z., Miura, S., Singh, J., Kumar, S., Ruddle, N. H., Galvani, A. P., & Dornburg, A. (2021). The durability of immunity against reinfection by SARS-CoV-2: a comparative evolutionary study. The Lancet Microbe, 2(12), e666–e675. https://doi.org/10.1016/s2666-5247(21)00219-6

Secondary Metabolism Gene Clusters Exhibit Increasingly Dynamic and Differential Expression during Asexual Growth, Conidiation, and Sexual Development in Neurospora crassa

mSystems / Jun 28, 2022

Wang, Z., Lopez-Giraldez, F., Slot, J., Yarden, O., Trail, F., & Townsend, J. P. (2022). Secondary Metabolism Gene Clusters Exhibit Increasingly Dynamic and Differential Expression during Asexual Growth, Conidiation, and Sexual Development in Neurospora crassa. MSystems, 7(3). https://doi.org/10.1128/msystems.00232-22

Transcriptional Divergence Underpinning Sexual Development in the Fungal Class Sordariomycetes

mBio / Jun 28, 2022

Kim, W., Wang, Z., Kim, H., Pham, K., Tu, Y., Townsend, J. P., & Trail, F. (2022). Transcriptional Divergence Underpinning Sexual Development in the Fungal Class Sordariomycetes. MBio, 13(3). https://doi.org/10.1128/mbio.01100-22

Integrative Activity of Mating Loci, Environmentally Responsive Genes, and Secondary Metabolism Pathways during Sexual Development of Chaetomium globosum

mBio / Dec 24, 2019

Wang, Z., López-Giráldez, F., Wang, J., Trail, F., & Townsend, J. P. (2019). Integrative Activity of Mating Loci, Environmentally Responsive Genes, and Secondary Metabolism Pathways during Sexual Development of Chaetomium globosum. MBio, 10(6). https://doi.org/10.1128/mbio.02119-19

Modelling microbial infection to address global health challenges

Nature Microbiology / Sep 20, 2019

Fitzpatrick, M. C., Bauch, C. T., Townsend, J. P., & Galvani, A. P. (2019). Modelling microbial infection to address global health challenges. Nature Microbiology, 4(10), 1612–1619. https://doi.org/10.1038/s41564-019-0565-8

Comparative Genomics and Transcriptomics During Sexual Development Gives Insight Into the Life History of the Cosmopolitan Fungus Fusarium neocosmosporiellum

Frontiers in Microbiology / Jun 07, 2019

Kim, W., Cavinder, B., Proctor, R. H., O’Donnell, K., Townsend, J. P., & Trail, F. (2019). Comparative Genomics and Transcriptomics During Sexual Development Gives Insight Into the Life History of the Cosmopolitan Fungus Fusarium neocosmosporiellum. Frontiers in Microbiology, 10. https://doi.org/10.3389/fmicb.2019.01247

Metabolism and Development during Conidial Germination in Response to a Carbon-Nitrogen-Rich Synthetic or a Natural Source of Nutrition in Neurospora crassa

mBio / Apr 30, 2019

Wang, Z., Miguel-Rojas, C., Lopez-Giraldez, F., Yarden, O., Trail, F., & Townsend, J. P. (2019). Metabolism and Development during Conidial Germination in Response to a Carbon-Nitrogen-Rich Synthetic or a Natural Source of Nutrition in Neurospora crassa. MBio, 10(2). https://doi.org/10.1128/mbio.00192-19

Using evolutionary genomics, transcriptomics, and systems biology to reveal gene networks underlying fungal development

Fungal Biology Reviews / Sep 01, 2018

Wang, Z., Gudibanda, A., Ugwuowo, U., Trail, F., & Townsend, J. P. (2018). Using evolutionary genomics, transcriptomics, and systems biology to reveal gene networks underlying fungal development. Fungal Biology Reviews, 32(4), 249–264. https://doi.org/10.1016/j.fbr.2018.02.001

Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum

mBio / Sep 05, 2018

Kim, W., Miguel-Rojas, C., Wang, J., Townsend, J. P., & Trail, F. (2018). Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum. MBio, 9(4). https://doi.org/10.1128/mbio.01292-18

Genomic Comparison Among Global Isolates of L. interrogans Serovars Copenhageni and Icterohaemorrhagiae Identified Natural Genetic Variation Caused by an Indel

Frontiers in Cellular and Infection Microbiology / Jun 19, 2018

Santos, L. A., Adhikarla, H., Yan, X., Wang, Z., Fouts, D. E., Vinetz, J. M., Alcantara, L. C. J., Hartskeerl, R. A., Goris, M. G. A., Picardeau, M., Reis, M. G., Townsend, J. P., Zhao, H., Ko, A. I., & Wunder, E. A. (2018). Genomic Comparison Among Global Isolates of L. interrogans Serovars Copenhageni and Icterohaemorrhagiae Identified Natural Genetic Variation Caused by an Indel. Frontiers in Cellular and Infection Microbiology, 8. https://doi.org/10.3389/fcimb.2018.00193

Lvr, a Signaling System That Controls Global Gene Regulation and Virulence in Pathogenic Leptospira

Frontiers in Cellular and Infection Microbiology / Feb 23, 2018

Adhikarla, H., Wunder, E. A., Mechaly, A. E., Mehta, S., Wang, Z., Santos, L., Bisht, V., Diggle, P., Murray, G., Adler, B., Lopez, F., Townsend, J. P., Groisman, E., Picardeau, M., Buschiazzo, A., & Ko, A. I. (2018). Lvr, a Signaling System That Controls Global Gene Regulation and Virulence in Pathogenic Leptospira. Frontiers in Cellular and Infection Microbiology, 8. https://doi.org/10.3389/fcimb.2018.00045

The Fast-Evolving phy-2 Gene Modulates Sexual Development in Response to Light in the Model Fungus Neurospora crassa

mBio / May 04, 2016

Wang, Z., Li, N., Li, J., Dunlap, J. C., Trail, F., & Townsend, J. P. (2016). The Fast-Evolving phy-2 Gene Modulates Sexual Development in Response to Light in the Model Fungus Neurospora crassa. MBio, 7(2). https://doi.org/10.1128/mbio.02148-15

Cellular Superspreaders: An Epidemiological Perspective on HIV Infection inside the Body

PLoS Pathogens / May 08, 2014

Talbert-Slagle, K., Atkins, K. E., Yan, K.-K., Khurana, E., Gerstein, M., Bradley, E. H., Berg, D., Galvani, A. P., & Townsend, J. P. (2014). Cellular Superspreaders: An Epidemiological Perspective on HIV Infection inside the Body. PLoS Pathogens, 10(5), e1004092. https://doi.org/10.1371/journal.ppat.1004092

Probabilistic uncertainty analysis of epidemiological modeling to guide public health intervention policy

Epidemics / Mar 01, 2014

Gilbert, J. A., Meyers, L. A., Galvani, A. P., & Townsend, J. P. (2014). Probabilistic uncertainty analysis of epidemiological modeling to guide public health intervention policy. Epidemics, 6, 37–45. https://doi.org/10.1016/j.epidem.2013.11.002

Global Gene Expression and Focused Knockout Analysis Reveals Genes Associated with Fungal Fruiting Body Development in Neurospora crassa

Eukaryotic Cell / Jan 01, 2014

Wang, Z., Lopez-Giraldez, F., Lehr, N., Farré, M., Common, R., Trail, F., & Townsend, J. P. (2014). Global Gene Expression and Focused Knockout Analysis Reveals Genes Associated with Fungal Fruiting Body Development in Neurospora crassa. Eukaryotic Cell, 13(1), 154–169. https://doi.org/10.1128/ec.00248-13

Detecting rare gene transfer events in bacterial populations

Frontiers in Microbiology / Jan 01, 2014

Nielsen, K. M., Bøhn, T., & Townsend, J. P. (2014). Detecting rare gene transfer events in bacterial populations. Frontiers in Microbiology, 4. https://doi.org/10.3389/fmicb.2013.00415

Yeast response to LA virus indicates coadapted global gene expression during mycoviral infection

FEMS Yeast Research / Jan 02, 2013

McBride, R. C., Boucher, N., Park, D. S., Turner, P. E., & Townsend, J. P. (2013). Yeast response to LA virus indicates coadapted global gene expression during mycoviral infection. FEMS Yeast Research, 13(2), 162–179. https://doi.org/10.1111/1567-1364.12019

Transcriptome analyses during fruiting body formation in Fusarium graminearum and Fusarium verticillioides reflect species life history and ecology

Fungal Genetics and Biology / Aug 01, 2012

Sikhakolli, U. R., López-Giráldez, F., Li, N., Common, R., Townsend, J. P., & Trail, F. (2012). Transcriptome analyses during fruiting body formation in Fusarium graminearum and Fusarium verticillioides reflect species life history and ecology. Fungal Genetics and Biology, 49(8), 663–673. https://doi.org/10.1016/j.fgb.2012.05.009

Sex-specific gene expression during asexual development of Neurospora crassa

Fungal Genetics and Biology / Jul 01, 2012

Wang, Z., Kin, K., López-Giráldez, F., Johannesson, H., & Townsend, J. P. (2012). Sex-specific gene expression during asexual development of Neurospora crassa. Fungal Genetics and Biology, 49(7), 533–543. https://doi.org/10.1016/j.fgb.2012.05.004

Differential impact of nutrition on developmental and metabolic gene expression during fruiting body development in Neurospora crassa

Fungal Genetics and Biology / May 01, 2012

Wang, Z., Lehr, N., Trail, F., & Townsend, J. P. (2012). Differential impact of nutrition on developmental and metabolic gene expression during fruiting body development in Neurospora crassa. Fungal Genetics and Biology, 49(5), 405–413. https://doi.org/10.1016/j.fgb.2012.03.004

Assessing the Probability of Detection of Horizontal Gene Transfer Events in Bacterial Populations

Frontiers in Microbiology / Jan 01, 2012

Townsend, J. P., Bøhn, T., & Nielsen, K. M. (2012). Assessing the Probability of Detection of Horizontal Gene Transfer Events in Bacterial Populations. Frontiers in Microbiology, 3. https://doi.org/10.3389/fmicb.2012.00027

SIR2 and other genes are abundantly expressed in long-lived natural segregants for replicative aging of the budding yeast Saccharomyces cerevisiae

FEMS Yeast Research / Mar 01, 2011

Guo, Z., Adomas, A. B., Jackson, E. D., Qin, H., & Townsend, J. P. (2011). SIR2 and other genes are abundantly expressed in long-lived natural segregants for replicative aging of the budding yeast Saccharomyces cerevisiae. FEMS Yeast Research, 11(4), 345–355. https://doi.org/10.1111/j.1567-1364.2011.00723.x

The filamentous fungal gene expression database (FFGED)

Fungal Genetics and Biology / Mar 01, 2010

Zhang, Z., & Townsend, J. P. (2010). The filamentous fungal gene expression database (FFGED). Fungal Genetics and Biology, 47(3), 199–204. https://doi.org/10.1016/j.fgb.2009.12.001

Phase-specific gene expression underlying morphological adaptations of the dimorphic human pathogenic fungus, Coccidioides posadasii

Fungal Genetics and Biology / Aug 01, 2006

Johannesson, H., Kasuga, T., Schaller, R. A., Good, B., Gardner, M. J., Townsend, J. P., Cole, G. T., & Taylor, J. W. (2006). Phase-specific gene expression underlying morphological adaptations of the dimorphic human pathogenic fungus, Coccidioides posadasii. Fungal Genetics and Biology, 43(8), 545–559. https://doi.org/10.1016/j.fgb.2006.02.003

Population structure and gene evolution inSaccharomyces cerevisiae

FEMS Yeast Research / Aug 01, 2006

Aa, E., Townsend, J. P., Adams, R. I., Nielsen, K. M., & Taylor, J. W. (2006). Population structure and gene evolution inSaccharomyces cerevisiae. FEMS Yeast Research, 6(5), 702–715. https://doi.org/10.1111/j.1567-1364.2006.00059.x

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Maurice O'Sullivan

Cork
University College Cork, School of Food and Nutritional Sciences
Most Relevant Research Interests
Microbiology
Other Research Interests (33)
sensory
meat
dairy
consumer
Food Science
And 28 more
About
Dr. Maurice O’ Sullivan is a sensory scientist and senior lecturer in food science working in the School of Food and Nutritional Sciences, UCC. In the past Maurice has worked in the food industry as a sensory scientist and flavour chemist for Diageo Baileys and Guinness. He has worked as a food technologist and process/product development scientist for the processed foods sector in the 1990’s as well as more recently a product development consultant to the dairy, meat and beverage industries. He has a Ph.D. in Sensory and Consumer science from the Department of Food Science, University of Copenhagen, Denmark as well as MSc. and BSc. Degrees in Food Science and Technology from University College Cork (UCC). Currently Maurice works in the School of Food and Nutritional Sciences, University College Cork as a senior lecturer and sensory and product reformulation project coordinator on large scale multi-million euro research projects. For many years he has also managed the “Sensory Unit” at UCC working on sensory and flavour based projects involving a diverse selection of products. This sensory science based service (at UCC) includes testing the difference, affective and descriptive analysis of foods and beverages as well as assessing shelf-life and comparing sensory results to microbiological and analytical (instrumental, physic-chemical) data using multivariate data analysis (MVA). Sensory testing is critical for new product development/optimisation, ingredient substitution and devising appropriate packaging and comparing foods or beverages to competitor’s products. Again, the key to unlocking the hidden secrets of this multimodal data is with MVA (Multivariate Data Analysis). To date Maurice has secured significant research funding of €5,300,000 Gross, €3,843,329.30 to UCC. He has worked in the area of targeted ingredient (salt, fat, sugar) reduction in foods since 1997. The focus of this research has been reduction of negative ingredients linked to civilisation diseases (Diabetes, Obesity, Heart Disease, Anaemia) while maintaining sensory properties, but also improving nutritional quality of developed products. To date this research has produced numerous publications with many more in development. Other research areas include Cross Cultural Sensory Perception of Irish Dairy Products in Asia, Europe and North America as well as Foods for the Elderly, Packaging and Meat optimisation. Maurice has published more than 200 sensory or consumer research based articles (papers, book chapters, proceedings etc.).
Most Relevant Publications (6+)

85 total publications

Microbial Succession and Flavor Production in the Fermented Dairy Beverage Kefir

mSystems / Oct 25, 2016

Walsh, A. M., Crispie, F., Kilcawley, K., O’Sullivan, O., O’Sullivan, M. G., Claesson, M. J., & Cotter, P. D. (2016). Microbial Succession and Flavor Production in the Fermented Dairy Beverage Kefir. MSystems, 1(5). https://doi.org/10.1128/msystems.00052-16

Factors Influencing the Flavour of Bovine Milk and Cheese from Grass Based versus Non-Grass Based Milk Production Systems

Foods / Mar 13, 2018

Kilcawley, K., Faulkner, H., Clarke, H., O’Sullivan, M., & Kerry, J. (2018). Factors Influencing the Flavour of Bovine Milk and Cheese from Grass Based versus Non-Grass Based Milk Production Systems. Foods, 7(3), 37. https://doi.org/10.3390/foods7030037

Evaluation of the Potential of Lactobacillus paracasei Adjuncts for Flavor Compounds Development and Diversification in Short-Aged Cheddar Cheese

Frontiers in Microbiology / Jul 05, 2018

Stefanovic, E., Kilcawley, K. N., Roces, C., Rea, M. C., O’Sullivan, M., Sheehan, J. J., & McAuliffe, O. (2018). Evaluation of the Potential of Lactobacillus paracasei Adjuncts for Flavor Compounds Development and Diversification in Short-Aged Cheddar Cheese. Frontiers in Microbiology, 9. https://doi.org/10.3389/fmicb.2018.01506

Comparison of Automated Extraction Techniques for Volatile Analysis of Whole Milk Powder

Foods / Sep 01, 2021

Cheng, Z., Mannion, D. T., O’Sullivan, M. G., Miao, S., Kerry, J. P., & Kilcawley, K. N. (2021). Comparison of Automated Extraction Techniques for Volatile Analysis of Whole Milk Powder. Foods, 10(9), 2061. https://doi.org/10.3390/foods10092061

Assessment and Use of Optical Oxygen Sensors as Tools to Assist in Optimal Product Component Selection for the Development of Packs of Ready-to-Eat Mixed Salads and for the Non-Destructive Monitoring of in-Pack Oxygen Levels Using Chilled Storage

Foods / May 22, 2013

Hempel, A., O’Sullivan, M., Papkovsky, D., & Kerry, J. (2013). Assessment and Use of Optical Oxygen Sensors as Tools to Assist in Optimal Product Component Selection for the Development of Packs of Ready-to-Eat Mixed Salads and for the Non-Destructive Monitoring of in-Pack Oxygen Levels Using Chilled Storage. Foods, 2(2), 213–224. https://doi.org/10.3390/foods2020213

Acquisition of the yeastKluyveromyces marxianusfrom unpasteurised milk by a kefir grain enhances kefir quality

FEMS Microbiology Letters / Jul 01, 2016

Gethins, L., Rea, M. C., Stanton, C., Ross, R. P., Kilcawley, K., O’Sullivan, M., Crotty, S., & Morrissey, J. P. (2016). Acquisition of the yeastKluyveromyces marxianusfrom unpasteurised milk by a kefir grain enhances kefir quality. FEMS Microbiology Letters, 363(16), fnw165. https://doi.org/10.1093/femsle/fnw165

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Francisco JRC Coelho

Aveiro
Researcher/ Microbiome/ Bussiness enthusiast
Most Relevant Research Interests
Microbiology
Other Research Interests (20)
Molecular biology
Microbial Ecology
Environmental Microbiology
Microbiome
Ecology
And 15 more
About
I am a generalist with a strong background in research and a passion for exploring new ideas and contributing to business development. My journey as a researcher began in 2009 at the University of Aveiro. Over the years, I progressed from a PhD student to a postdoctoral researcher and ultimately became a researcher, funding my positions through competitive calls. My technical background spans across several areas and with different degrees of expertise. These include microbiology, microbiome analysis, molecular biology, bioinformatic and biostatistics. I have authored and co-authored over 35 articles, some of which have been published in high profile scientific journals (https://www.cienciavitae.pt/portal/2119-2C29-3E33). I have co-founded two startups and was involved in all the process, including IP protection, prototype development, and engaging potential customers. I possess a comprehensive understanding of day-to-day business operations, including marketing, sales, and finance. I am driven by curiosity to learn and thrive in dynamic environments that foster innovation and growth.
Most Relevant Publications (3+)

37 total publications

Relation between bacterial activity in the surface microlayer and estuarine hydrodynamics

FEMS Microbiology Ecology / Jul 19, 2011

Santos, L., Santos, A. L., Coelho, F. J. R. C., Gomes, N. C. M., Dias, J. M., Cunha, Â., & Almeida, A. (2011). Relation between bacterial activity in the surface microlayer and estuarine hydrodynamics: Bacterial activity in the SML and estuarine hydrodynamics. FEMS Microbiology Ecology, 77(3), 636–646. https://doi.org/10.1111/j.1574-6941.2011.01147.x

Brachybacterium atlanticum sp. nov., a novel marine bacterium isolated from the Atlantic Ocean

International Journal of Systematic and Evolutionary Microbiology / Aug 04, 2023

de Castro, I., Ribeiro, S., Oliveira, V., Coelho, F. J. R. C., de Lurdes Dapkevicius, M., de Azevedo, E. B., & Barcelos e Ramos, J. (2023). Brachybacterium atlanticum sp. nov., a novel marine bacterium isolated from the Atlantic Ocean. International Journal of Systematic and Evolutionary Microbiology, 73(8). https://doi.org/10.1099/ijsem.0.005959

Emiliania huxleyi—Bacteria Interactions under Increasing CO2 Concentrations

Microorganisms / Dec 13, 2022

Barcelos e Ramos, J., Ribeiro, S. C., Schulz, K. G., Coelho, F. J. R. D. C., Oliveira, V., Cunha, A., Gomes, N. C. M., Brownlee, C., Passow, U., & de Azevedo, E. B. (2022). Emiliania huxleyi—Bacteria Interactions under Increasing CO2 Concentrations. Microorganisms, 10(12), 2461. https://doi.org/10.3390/microorganisms10122461

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Ariel Aptekmann

Bioinformatician at Hackensack Meridian Hospital Center for Discovery and Innovation
Most Relevant Research Interests
Microbiology
Other Research Interests (21)
Computational biology
bioinformatics
metagenomics
evolution
Genetics
And 16 more
About
I am a bioinformatician and researcher in computational biology. My research focuses on the application of machine learning and data analysis to understand the molecular basis of disease. I also work on developing novel software tools for data management and analysis.
Most Relevant Publications (2+)

24 total publications

Ecology theory disentangles microbial dichotomies

Environmental Microbiology / Sep 05, 2023

Couso, L. L., Soler‐Bistué, A., Aptekmann, A. A., & Sánchez, I. E. (2023). Ecology theory disentangles microbial dichotomies. Environmental Microbiology. Portico. https://doi.org/10.1111/1462-2920.16495

Ecology theory disentangles microbial dichotomies

Environmental Microbiology / Sep 05, 2023

Couso, L. L., Soler‐Bistué, A., Aptekmann, A. A., & Sánchez, I. E. (2023). Ecology theory disentangles microbial dichotomies. Environmental Microbiology. Portico. https://doi.org/10.1111/1462-2920.16495

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Carissa Pardamean, PhD

Cambridge, Massachusetts, United States of America
Scientific writer and linguist with a wide variety of experiences, including bench science and data analytics. Have worked in research on smoking cessation and nicotine metabolism, colorectal cancer risk, virology, and RNA biology.
Most Relevant Research Interests
Microbiology
Other Research Interests (16)
molecular virology
RNA biology
cellular biology
statistical analysis
scientific writing
And 11 more
About
As a scientific writer and editor, I have had 12+ years experience in scientific writing and editing as the in-house editor, translator, and molecular biology consultant for BioRealm and Bina Nusantara University. I have applied the writing and editing skills during my graduate study years to co-author and edit numerous grants to funding and manuscripts for publications. I have leveraged my training in linguistics to convey information in writing more efficiently and precisely. As a bench scientist, my most recent experiences (6 years) are on RNA biology and virology. I have an overall 10 years experience in molecular and cellular biology techniques. As a linguist, I currently am a lexical linguist, curating the Indonesian language database for Apple. SUMMARY/HIGHLIGHTS Bench science research experience: molecular virology \| RNA biology \| host\-virus interaction \| viral pathogenesis \| gammaherpesvirus \| molecular & cellular biology \| yeast genetics \| OB/GYN oncology Analytical/writing/editing non-bench research experience: nicotine addiction and metabolism \| colorectal cancer risk\, epidemiology\, pathogenesis \| thyroid disorder management \| rice agrogenetics \| linguistics and NPL \| AI/ML application on sciences Some conceptual knowledge (mainly through editing during graduate studies): vaccine candidate platform validation \| immunology \| endosomal recycling pathway Transferable skills: quick learner in new scientific fields and methods \| scientific writing for publications and grants \| basic and clinical studies \| independent project planning \| statistical analysis \| leadership and mentorship
Most Relevant Publications (1+)

8 total publications

Inhibition of Host Gene Expression by KSHV: Sabotaging mRNA Stability and Nuclear Export

Frontiers in Cellular and Infection Microbiology / Apr 09, 2021

Pardamean, C. I., & Wu, T.-T. (2021). Inhibition of Host Gene Expression by KSHV: Sabotaging mRNA Stability and Nuclear Export. Frontiers in Cellular and Infection Microbiology, 11. https://doi.org/10.3389/fcimb.2021.648055

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Adedayo Oyedele Ph.D.

Research Scientist (Soil Microbiology) with vast experience in carrying out demand driven researches.
Most Relevant Research Interests
Microbiology
Other Research Interests (11)
Environmental Microbiology
Beneficial microbes
Plant Growth Promoting Rhizobacteria (PGPR)
Biofertilisers
Food Science
And 6 more
About
Environmental scientist (Soil microbiologist) with vast experience in carrying out farmer demand driven researches, for improved agricultural production, food security and agricultural sustainability while ensuring environmental sustainability. Vast experience in the development of technologies to solve agricultural and soil challenges using microbial technology. Executed various applied researches in sub-saharan Africa by  attracting national and  international grants.
Most Relevant Publications (4+)

31 total publications

Antifungal activities of Bacillus subtilis isolated from some condiments and soil

African Journal of Microbiology Research / Apr 30, 2014

Oyedele, A. O., & Ogunbanwo, T. S. (2014). Antifungal activities of Bacillus subtilis isolated from some condiments and soil. African Journal of Microbiology Research, 8(18), 1841–1849. https://doi.org/10.5897/ajmr2013.6162

Fungal and bacterial metabolites of stored maize (Zea mays, L.) from five agro-ecological zones of Nigeria

Mycotoxin Research / Mar 20, 2014

Adetunji, M., Atanda, O., Ezekiel, C. N., Sulyok, M., Warth, B., Beltrán, E., Krska, R., Obadina, O., Bakare, A., & Chilaka, C. A. (2014). Fungal and bacterial metabolites of stored maize (Zea mays, L.) from five agro-ecological zones of Nigeria. Mycotoxin Research, 30(2), 89–102. https://doi.org/10.1007/s12550-014-0194-2

Biofertilising, plant-stimulating and biocontrol potentials of maize plant growth promoting rhizobacteria isolated in central and northern Benin

African Journal of Microbiology Research / Jul 28, 2018

Nadège, A. A., Olaréwadjou, A., Pacôme, A. N., Gustave, D., Hafiz, A. S., Rachidath, K., Abdel-Madjid, A., Oyedele, A., Farid, B.-M., Adolphe, A., & Lamine, S. B.-M. (2018). Biofertilising, plant-stimulating and biocontrol potentials of maize plant growth promoting rhizobacteria isolated in central and northern Benin. African Journal of Microbiology Research, 12(28), 664–672. https://doi.org/10.5897/ajmr2018.8916

Evaluation of efficacy of some botanicals and bioagents against stalk and ear rot pathogen of maize, Fusarium verticillioides

African Journal of Microbiology Research / Jun 18, 2014

Akinbode, O. A., Ikotun, T., Odebode, A. C., Omoloye, O. A., & and, O., A. O. (2014). Evaluation of efficacy of some botanicals and bioagents against stalk and ear rot pathogen of maize, Fusarium verticillioides. African Journal of Microbiology Research, 8(25), 2423–2428. https://doi.org/10.5897/ajmr2014.6704

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Ganna Galitska

Portland, Oregon, United States of America
Former Postdoctoral Fellow at the University of Maryland
Most Relevant Research Interests
Microbiology
Other Research Interests (12)
Virology
Molecular Biology
Cell Biology
Immunology and Allergy
Immunology
And 7 more
About
Research Scientist \| Ph\.D\. and Postdoc in Microbiology & Virology \| Molecular and Cell Biologist
Most Relevant Publications (6+)

18 total publications

Enterovirus D68 capsid formation and stability requires acidic compartments

mBio / Oct 31, 2023

Galitska, G., Jassey, A., Wagner, M. A., Pollack, N., Miller, K., & Jackson, W. T. (2023). Enterovirus D68 capsid formation and stability requires acidic compartments. MBio, 14(5). https://doi.org/10.1128/mbio.02141-23

Risk of Symptomatic Infection after Non-Primary Congenital Cytomegalovirus Infection

Microorganisms / May 25, 2020

Coscia, A., Leone, A., Rubino, C., Galitska, G., Biolatti, M., Bertino, E., Peila, C., & Cresi, F. (2020). Risk of Symptomatic Infection after Non-Primary Congenital Cytomegalovirus Infection. Microorganisms, 8(5), 786. https://doi.org/10.3390/microorganisms8050786

Tuning the Orchestra: HCMV vs. Innate Immunity

Frontiers in Microbiology / Apr 15, 2020

Dell’Oste, V., Biolatti, M., Galitska, G., Griffante, G., Gugliesi, F., Pasquero, S., Zingoni, A., Cerboni, C., & De Andrea, M. (2020). Tuning the Orchestra: HCMV vs. Innate Immunity. Frontiers in Microbiology, 11. https://doi.org/10.3389/fmicb.2020.00661

A Conserved Mechanism of APOBEC3 Relocalization by Herpesviral Ribonucleotide Reductase Large Subunits

Journal of Virology / Dec 01, 2019

Cheng, A. Z., Moraes, S. N., Attarian, C., Yockteng-Melgar, J., Jarvis, M. C., Biolatti, M., Galitska, G., Dell’Oste, V., Frappier, L., Bierle, C. J., Rice, S. A., & Harris, R. S. (2019). A Conserved Mechanism of APOBEC3 Relocalization by Herpesviral Ribonucleotide Reductase Large Subunits. Journal of Virology, 93(23). https://doi.org/10.1128/jvi.01539-19

Slow Infection due to Lowering the Amount of Intact versus Empty Particles Is a Characteristic Feature of Coxsackievirus B5 Dictated by the Structural Proteins

Journal of Virology / Oct 15, 2019

Turkki, P., Laajala, M., Stark, M., Vandesande, H., Sallinen-Dal Maso, H., Shroff, S., Sävneby, A., Galitska, G., Lindberg, A. M., & Marjomäki, V. (2019). Slow Infection due to Lowering the Amount of Intact versus Empty Particles Is a Characteristic Feature of Coxsackievirus B5 Dictated by the Structural Proteins. Journal of Virology, 93(20). https://doi.org/10.1128/jvi.01130-19

Strategy of Human Cytomegalovirus To Escape Interferon Beta-Induced APOBEC3G Editing Activity

Journal of Virology / Oct 01, 2018

Pautasso, S., Galitska, G., Dell’Oste, V., Biolatti, M., Cagliani, R., Forni, D., De Andrea, M., Gariglio, M., Sironi, M., & Landolfo, S. (2018). Strategy of Human Cytomegalovirus To Escape Interferon Beta-Induced APOBEC3G Editing Activity. Journal of Virology, 92(19). https://doi.org/10.1128/jvi.01224-18

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Dr. David Siderovski, Ph.D.

Professor of Computational Pharmacology
Most Relevant Research Interests
Microbiology
Other Research Interests (27)
Regulator of G protein Signaling (RGS) proteins
Pharmacology
Molecular Biology
Cellular and Molecular Neuroscience
Molecular Medicine
And 22 more
About
Dr. David Siderovski is a renowned scientist and academic, with a career spanning over two decades. He received his Ph.D. in Medical Biophysics from the University of Toronto in 1997, where he specialized in signal transduction and cellular signaling pathways. After completing his doctorate, Dr. Siderovski held various faculty positions at prestigious universities, including the University of North Carolina at Chapel Hill, West Virginia University School of Medicine, and the University of North Texas Health Science Center. At these institutions, Dr. Siderovski has made significant contributions to the field of pharmacology through his research on G protein-coupled receptors (GPCRs) and RGS proteins, which are key regulators of GPCR cellular signaling. His work has helped to advance the understanding of RGS proteins and their roles in various diseases, including cancer, cardiovascular disorders, and neurological disorders. In addition to his research, Dr. Siderovski is also a dedicated educator and mentor. He has taught and mentored numerous undergraduate, graduate, and medical students, and has served as a mentor for postdoctoral fellows and junior faculty members. He is known for his passion and enthusiasm for science and his ability to inspire and guide the next generation of scientists. Dr. Siderovski has received numerous awards and honors for his contributions to the scientific community. He was the recipient of the Abel Award in 2004 from the American Society of Pharmacology & Experimental Therapeutics for his pioneering discoveries of the RGS proteins and the GoLoco motif. He has also served on editorial boards of several scientific journals (including a decade at *J.Biol.Chem.*) and has been a member of various scientific committees, NIH study section panels, and pharma/biotech advisory boards, including for Inspire, Wyeth, and BellBrook Labs. Overall, Dr. David Siderovski is a highly accomplished and respected scientist and educator, whose research has had a significant impact on the field of pharmacology. His dedication and passion for science continue to inspire and influence the next generation of researchers in this field.
Most Relevant Publications (2+)

95 total publications

Genome-Scale Analysis Reveals Sst2 as the Principal Regulator of Mating Pheromone Signaling in the Yeast Saccharomyces cerevisiae

Eukaryotic Cell / Feb 01, 2006

Chasse, S. A., Flanary, P., Parnell, S. C., Hao, N., Cha, J. Y., Siderovski, D. P., & Dohlman, H. G. (2006). Genome-Scale Analysis Reveals Sst2 as the Principal Regulator of Mating Pheromone Signaling in the Yeast Saccharomyces cerevisiae. Eukaryotic Cell, 5(2), 330–346. https://doi.org/10.1128/ec.5.2.330-346.2006

A P-loop Mutation in Gα Subunits Prevents Transition to the Active State: Implications for G-protein Signaling in Fungal Pathogenesis

PLoS Pathogens / Feb 23, 2012

Bosch, D. E., Willard, F. S., Ramanujam, R., Kimple, A. J., Willard, M. D., Naqvi, N. I., & Siderovski, D. P. (2012). A P-loop Mutation in Gα Subunits Prevents Transition to the Active State: Implications for G-protein Signaling in Fungal Pathogenesis. PLoS Pathogens, 8(2), e1002553. https://doi.org/10.1371/journal.ppat.1002553

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Example microbiology projects

How can companies collaborate more effectively with researchers, experts, and thought leaders to make progress on microbiology?

Development of Novel Antibiotics

A pharmaceutical company can collaborate with a Microbiology expert to develop new antibiotics to combat antibiotic-resistant bacteria. The researcher can contribute their knowledge of microbial mechanisms and drug discovery techniques to identify potential targets and develop effective treatments.

Food Safety Enhancement

A food production company can work with a Microbiology researcher to improve food safety measures. The researcher can conduct microbial analysis, develop protocols for contamination prevention, and provide guidance on proper handling and storage of food products.

Bioremediation Solutions

An environmental consulting firm can partner with a Microbiology expert to develop bioremediation solutions for contaminated sites. The researcher can identify and cultivate microbial species capable of degrading pollutants, leading to effective and sustainable remediation strategies.

Infectious Disease Surveillance

A healthcare organization can collaborate with a Microbiology expert to establish an infectious disease surveillance system. The researcher can provide expertise in pathogen detection, monitoring, and data analysis, enabling early detection and response to outbreaks.

Microbial Product Development

A biotechnology company can partner with a Microbiology researcher to develop microbial-based products. The researcher can contribute their knowledge of microbial metabolism and genetic engineering to optimize production processes and enhance product efficacy.