Work with academic experts in microbiology
A scholar or researcher with expertise in microbiology can help business and industrial clients solve their microbiology problems and conduct microbiology research to get ahead on R&D. Experts on NotedSource with backgrounds in microbiology include Brandon Reynante, Manohary Rajendram, Katherine Amidon, Mark Schneegurt, Giuliana Noratto, Michael Paxhia, Sally Irwin, Artemis Louyakis, Melanie Ikeh, Paulo Zaini, Jeffrey Townsend, Diane Imburgio, Diane Imburgio, Raymond Weil, Peter Reich, Krti Tallam, Michael W Harman, Dr. Susanne Ressl, and John Joe.
Brandon Reynante
I'm a PhD candidate in learning sciences at Stanford University. I create technologies and learning experiences that empower people to design and engineer sustainable futures.
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6 total publications
A Framework for Open Civic Design: Integrating Public Participation, Crowdsourcing, and Design Thinking
Digital Government: Research and Practice / Oct 31, 2021
Reynante, B., Dow, S. P., & Mahyar, N. (2021). A Framework for Open Civic Design: Integrating Public Participation, Crowdsourcing, and Design Thinking. Digital Government: Research and Practice, 2(4), 1–22. https://doi.org/10.1145/3487607
Giuliana Noratto
Food Scientist PhD and Registered Dietician - Texas A&M University
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91 total publications
Molecular exploration of fecal microbiome in quinoa-supplemented obese mice
FEMS Microbiology Ecology / Apr 27, 2016
Garcia-Mazcorro, J. F., Mills, D., & Noratto, G. (2016). Molecular exploration of fecal microbiome in quinoa-supplemented obese mice. FEMS Microbiology Ecology, 92(7), fiw089. https://doi.org/10.1093/femsec/fiw089
Jeffrey Townsend
Professor of Biostatistics and Ecology & Evolutionary Biology
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207 total publications
Horizontal gene transfer, genome innovation and evolution
Nature Reviews Microbiology / Aug 01, 2005
Gogarten, J. P., & Townsend, J. P. (2005). Horizontal gene transfer, genome innovation and evolution. Nature Reviews Microbiology, 3(9), 679–687. https://doi.org/10.1038/nrmicro1204
The durability of immunity against reinfection by SARS-CoV-2: a comparative evolutionary study
The Lancet Microbe / Dec 01, 2021
Townsend, J. P., Hassler, H. B., Wang, Z., Miura, S., Singh, J., Kumar, S., Ruddle, N. H., Galvani, A. P., & Dornburg, A. (2021). The durability of immunity against reinfection by SARS-CoV-2: a comparative evolutionary study. The Lancet Microbe, 2(12), e666–e675. https://doi.org/10.1016/s2666-5247(21)00219-6
Secondary Metabolism Gene Clusters Exhibit Increasingly Dynamic and Differential Expression during Asexual Growth, Conidiation, and Sexual Development in Neurospora crassa
mSystems / Jun 28, 2022
Wang, Z., Lopez-Giraldez, F., Slot, J., Yarden, O., Trail, F., & Townsend, J. P. (2022). Secondary Metabolism Gene Clusters Exhibit Increasingly Dynamic and Differential Expression during Asexual Growth, Conidiation, and Sexual Development in Neurospora crassa. MSystems, 7(3). https://doi.org/10.1128/msystems.00232-22
Transcriptional Divergence Underpinning Sexual Development in the Fungal Class Sordariomycetes
mBio / Jun 28, 2022
Kim, W., Wang, Z., Kim, H., Pham, K., Tu, Y., Townsend, J. P., & Trail, F. (2022). Transcriptional Divergence Underpinning Sexual Development in the Fungal Class Sordariomycetes. MBio, 13(3). https://doi.org/10.1128/mbio.01100-22
Integrative Activity of Mating Loci, Environmentally Responsive Genes, and Secondary Metabolism Pathways during Sexual Development of Chaetomium globosum
mBio / Dec 24, 2019
Wang, Z., López-Giráldez, F., Wang, J., Trail, F., & Townsend, J. P. (2019). Integrative Activity of Mating Loci, Environmentally Responsive Genes, and Secondary Metabolism Pathways during Sexual Development of Chaetomium globosum. MBio, 10(6). https://doi.org/10.1128/mbio.02119-19
Modelling microbial infection to address global health challenges
Nature Microbiology / Sep 20, 2019
Fitzpatrick, M. C., Bauch, C. T., Townsend, J. P., & Galvani, A. P. (2019). Modelling microbial infection to address global health challenges. Nature Microbiology, 4(10), 1612–1619. https://doi.org/10.1038/s41564-019-0565-8
Comparative Genomics and Transcriptomics During Sexual Development Gives Insight Into the Life History of the Cosmopolitan Fungus Fusarium neocosmosporiellum
Frontiers in Microbiology / Jun 07, 2019
Kim, W., Cavinder, B., Proctor, R. H., O’Donnell, K., Townsend, J. P., & Trail, F. (2019). Comparative Genomics and Transcriptomics During Sexual Development Gives Insight Into the Life History of the Cosmopolitan Fungus Fusarium neocosmosporiellum. Frontiers in Microbiology, 10. https://doi.org/10.3389/fmicb.2019.01247
Metabolism and Development during Conidial Germination in Response to a Carbon-Nitrogen-Rich Synthetic or a Natural Source of Nutrition in Neurospora crassa
mBio / Apr 30, 2019
Wang, Z., Miguel-Rojas, C., Lopez-Giraldez, F., Yarden, O., Trail, F., & Townsend, J. P. (2019). Metabolism and Development during Conidial Germination in Response to a Carbon-Nitrogen-Rich Synthetic or a Natural Source of Nutrition in Neurospora crassa. MBio, 10(2). https://doi.org/10.1128/mbio.00192-19
Using evolutionary genomics, transcriptomics, and systems biology to reveal gene networks underlying fungal development
Fungal Biology Reviews / Sep 01, 2018
Wang, Z., Gudibanda, A., Ugwuowo, U., Trail, F., & Townsend, J. P. (2018). Using evolutionary genomics, transcriptomics, and systems biology to reveal gene networks underlying fungal development. Fungal Biology Reviews, 32(4), 249–264. https://doi.org/10.1016/j.fbr.2018.02.001
Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum
mBio / Sep 05, 2018
Kim, W., Miguel-Rojas, C., Wang, J., Townsend, J. P., & Trail, F. (2018). Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum. MBio, 9(4). https://doi.org/10.1128/mbio.01292-18
Genomic Comparison Among Global Isolates of L. interrogans Serovars Copenhageni and Icterohaemorrhagiae Identified Natural Genetic Variation Caused by an Indel
Frontiers in Cellular and Infection Microbiology / Jun 19, 2018
Santos, L. A., Adhikarla, H., Yan, X., Wang, Z., Fouts, D. E., Vinetz, J. M., Alcantara, L. C. J., Hartskeerl, R. A., Goris, M. G. A., Picardeau, M., Reis, M. G., Townsend, J. P., Zhao, H., Ko, A. I., & Wunder, E. A. (2018). Genomic Comparison Among Global Isolates of L. interrogans Serovars Copenhageni and Icterohaemorrhagiae Identified Natural Genetic Variation Caused by an Indel. Frontiers in Cellular and Infection Microbiology, 8. https://doi.org/10.3389/fcimb.2018.00193
Lvr, a Signaling System That Controls Global Gene Regulation and Virulence in Pathogenic Leptospira
Frontiers in Cellular and Infection Microbiology / Feb 23, 2018
Adhikarla, H., Wunder, E. A., Mechaly, A. E., Mehta, S., Wang, Z., Santos, L., Bisht, V., Diggle, P., Murray, G., Adler, B., Lopez, F., Townsend, J. P., Groisman, E., Picardeau, M., Buschiazzo, A., & Ko, A. I. (2018). Lvr, a Signaling System That Controls Global Gene Regulation and Virulence in Pathogenic Leptospira. Frontiers in Cellular and Infection Microbiology, 8. https://doi.org/10.3389/fcimb.2018.00045
The Fast-Evolving phy-2 Gene Modulates Sexual Development in Response to Light in the Model Fungus Neurospora crassa
mBio / May 04, 2016
Wang, Z., Li, N., Li, J., Dunlap, J. C., Trail, F., & Townsend, J. P. (2016). The Fast-Evolving phy-2 Gene Modulates Sexual Development in Response to Light in the Model Fungus Neurospora crassa. MBio, 7(2). https://doi.org/10.1128/mbio.02148-15
Cellular Superspreaders: An Epidemiological Perspective on HIV Infection inside the Body
PLoS Pathogens / May 08, 2014
Talbert-Slagle, K., Atkins, K. E., Yan, K.-K., Khurana, E., Gerstein, M., Bradley, E. H., Berg, D., Galvani, A. P., & Townsend, J. P. (2014). Cellular Superspreaders: An Epidemiological Perspective on HIV Infection inside the Body. PLoS Pathogens, 10(5), e1004092. https://doi.org/10.1371/journal.ppat.1004092
Probabilistic uncertainty analysis of epidemiological modeling to guide public health intervention policy
Epidemics / Mar 01, 2014
Gilbert, J. A., Meyers, L. A., Galvani, A. P., & Townsend, J. P. (2014). Probabilistic uncertainty analysis of epidemiological modeling to guide public health intervention policy. Epidemics, 6, 37–45. https://doi.org/10.1016/j.epidem.2013.11.002
Global Gene Expression and Focused Knockout Analysis Reveals Genes Associated with Fungal Fruiting Body Development in Neurospora crassa
Eukaryotic Cell / Jan 01, 2014
Wang, Z., Lopez-Giraldez, F., Lehr, N., Farré, M., Common, R., Trail, F., & Townsend, J. P. (2014). Global Gene Expression and Focused Knockout Analysis Reveals Genes Associated with Fungal Fruiting Body Development in Neurospora crassa. Eukaryotic Cell, 13(1), 154–169. https://doi.org/10.1128/ec.00248-13
Detecting rare gene transfer events in bacterial populations
Frontiers in Microbiology / Jan 01, 2014
Nielsen, K. M., Bøhn, T., & Townsend, J. P. (2014). Detecting rare gene transfer events in bacterial populations. Frontiers in Microbiology, 4. https://doi.org/10.3389/fmicb.2013.00415
Yeast response to LA virus indicates coadapted global gene expression during mycoviral infection
FEMS Yeast Research / Jan 02, 2013
McBride, R. C., Boucher, N., Park, D. S., Turner, P. E., & Townsend, J. P. (2013). Yeast response to LA virus indicates coadapted global gene expression during mycoviral infection. FEMS Yeast Research, 13(2), 162–179. https://doi.org/10.1111/1567-1364.12019
Transcriptome analyses during fruiting body formation in Fusarium graminearum and Fusarium verticillioides reflect species life history and ecology
Fungal Genetics and Biology / Aug 01, 2012
Sikhakolli, U. R., López-Giráldez, F., Li, N., Common, R., Townsend, J. P., & Trail, F. (2012). Transcriptome analyses during fruiting body formation in Fusarium graminearum and Fusarium verticillioides reflect species life history and ecology. Fungal Genetics and Biology, 49(8), 663–673. https://doi.org/10.1016/j.fgb.2012.05.009
Sex-specific gene expression during asexual development of Neurospora crassa
Fungal Genetics and Biology / Jul 01, 2012
Wang, Z., Kin, K., López-Giráldez, F., Johannesson, H., & Townsend, J. P. (2012). Sex-specific gene expression during asexual development of Neurospora crassa. Fungal Genetics and Biology, 49(7), 533–543. https://doi.org/10.1016/j.fgb.2012.05.004
Differential impact of nutrition on developmental and metabolic gene expression during fruiting body development in Neurospora crassa
Fungal Genetics and Biology / May 01, 2012
Wang, Z., Lehr, N., Trail, F., & Townsend, J. P. (2012). Differential impact of nutrition on developmental and metabolic gene expression during fruiting body development in Neurospora crassa. Fungal Genetics and Biology, 49(5), 405–413. https://doi.org/10.1016/j.fgb.2012.03.004
Assessing the Probability of Detection of Horizontal Gene Transfer Events in Bacterial Populations
Frontiers in Microbiology / Jan 01, 2012
Townsend, J. P., Bøhn, T., & Nielsen, K. M. (2012). Assessing the Probability of Detection of Horizontal Gene Transfer Events in Bacterial Populations. Frontiers in Microbiology, 3. https://doi.org/10.3389/fmicb.2012.00027
SIR2 and other genes are abundantly expressed in long-lived natural segregants for replicative aging of the budding yeast Saccharomyces cerevisiae
FEMS Yeast Research / Mar 01, 2011
Guo, Z., Adomas, A. B., Jackson, E. D., Qin, H., & Townsend, J. P. (2011). SIR2 and other genes are abundantly expressed in long-lived natural segregants for replicative aging of the budding yeast Saccharomyces cerevisiae. FEMS Yeast Research, 11(4), 345–355. https://doi.org/10.1111/j.1567-1364.2011.00723.x
The filamentous fungal gene expression database (FFGED)
Fungal Genetics and Biology / Mar 01, 2010
Zhang, Z., & Townsend, J. P. (2010). The filamentous fungal gene expression database (FFGED). Fungal Genetics and Biology, 47(3), 199–204. https://doi.org/10.1016/j.fgb.2009.12.001
Phase-specific gene expression underlying morphological adaptations of the dimorphic human pathogenic fungus, Coccidioides posadasii
Fungal Genetics and Biology / Aug 01, 2006
Johannesson, H., Kasuga, T., Schaller, R. A., Good, B., Gardner, M. J., Townsend, J. P., Cole, G. T., & Taylor, J. W. (2006). Phase-specific gene expression underlying morphological adaptations of the dimorphic human pathogenic fungus, Coccidioides posadasii. Fungal Genetics and Biology, 43(8), 545–559. https://doi.org/10.1016/j.fgb.2006.02.003
Population structure and gene evolution inSaccharomyces cerevisiae
FEMS Yeast Research / Aug 01, 2006
Aa, E., Townsend, J. P., Adams, R. I., Nielsen, K. M., & Taylor, J. W. (2006). Population structure and gene evolution inSaccharomyces cerevisiae. FEMS Yeast Research, 6(5), 702–715. https://doi.org/10.1111/j.1567-1364.2006.00059.x
Raymond Weil
Professor of Soil Science at the University of Maryland
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66 total publications
Microwave irradiation of soil for routine measurement of microbial biomass carbon
Biology and Fertility of Soils / Sep 18, 1998
Islam, K. R., & Weil, R. R. (1998). Microwave irradiation of soil for routine measurement of microbial biomass carbon. Biology and Fertility of Soils, 27(4), 408–416. https://doi.org/10.1007/s003740050451
Freeze-dried soil extraction method for the measurement of microbial biomass C
Biology and Fertility of Soils / Feb 17, 1997
Islam, K. R., Weil, R. R., Mulchi, C. L., & Glenn, S. D. (1997). Freeze-dried soil extraction method for the measurement of microbial biomass C. Biology and Fertility of Soils, 24(2), 205–210. https://doi.org/10.1007/s003740050232
Effects of manuring on the arthropod community in an arable soil
Soil Biology and Biochemistry / Jan 01, 1979
Weil, R. R., & Kroontje, W. (1979). Effects of manuring on the arthropod community in an arable soil. Soil Biology and Biochemistry, 11(6), 669–679. https://doi.org/10.1016/0038-0717(79)90037-3
Peter Reich
Director of the Institute for Global Change Biology (IGCB)
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509 total publications
It is elemental: soil nutrient stoichiometry drives bacterial diversity
Environmental Microbiology / Feb 03, 2017
Delgado-Baquerizo, M., Reich, P. B., Khachane, A. N., Campbell, C. D., Thomas, N., Freitag, T. E., Abu Al-Soud, W., Sørensen, S., Bardgett, R. D., & Singh, B. K. (2017). It is elemental: soil nutrient stoichiometry drives bacterial diversity. Environmental Microbiology, 19(3), 1176–1188. Portico. https://doi.org/10.1111/1462-2920.13642
Metagenomic reconstruction of nitrogen cycling pathways in a CO2-enriched grassland ecosystem
Soil Biology and Biochemistry / Mar 01, 2017
Tu, Q., He, Z., Wu, L., Xue, K., Xie, G., Chain, P., Reich, P. B., Hobbie, S. E., & Zhou, J. (2017). Metagenomic reconstruction of nitrogen cycling pathways in a CO2-enriched grassland ecosystem. Soil Biology and Biochemistry, 106, 99–108. https://doi.org/10.1016/j.soilbio.2016.12.017
Light, earthworms, and soil resources as predictors of diversity of 10 soil invertebrate groups across monocultures of 14 tree species
Soil Biology and Biochemistry / Jan 01, 2016
Mueller, K. E., Eisenhauer, N., Reich, P. B., Hobbie, S. E., Chadwick, O. A., Chorover, J., Dobies, T., Hale, C. M., Jagodziński, A. M., Kałucka, I., Kasprowicz, M., Kieliszewska-Rokicka, B., Modrzyński, J., Rożen, A., Skorupski, M., Sobczyk, Ł., Stasińska, M., Trocha, L. K., Weiner, J., … Oleksyn, J. (2016). Light, earthworms, and soil resources as predictors of diversity of 10 soil invertebrate groups across monocultures of 14 tree species. Soil Biology and Biochemistry, 92, 184–198. https://doi.org/10.1016/j.soilbio.2015.10.010
Elevated CO2 influences microbial carbon and nitrogen cycling
BMC Microbiology / Jan 01, 2013
Xu, M., He, Z., Deng, Y., Wu, L., van Nostrand, J. D., Hobbie, S. E., Reich, P. B., & Zhou, J. (2013). Elevated CO2 influences microbial carbon and nitrogen cycling. BMC Microbiology, 13(1), 124. https://doi.org/10.1186/1471-2180-13-124
What controls the concentration of various aliphatic lipids in soil?
Soil Biology and Biochemistry / Aug 01, 2013
Mueller, K. E., Eissenstat, D. M., Müller, C. W., Oleksyn, J., Reich, P. B., & Freeman, K. H. (2013). What controls the concentration of various aliphatic lipids in soil? Soil Biology and Biochemistry, 63, 14–17. https://doi.org/10.1016/j.soilbio.2013.03.021
Above- and below-ground plant inputs both fuel soil food webs
Soil Biology and Biochemistry / Feb 01, 2012
Eisenhauer, N., & Reich, P. B. (2012). Above- and below-ground plant inputs both fuel soil food webs. Soil Biology and Biochemistry, 45, 156–160. https://doi.org/10.1016/j.soilbio.2011.10.019
The phylogenetic composition and structure of soil microbial communities shifts in response to elevated carbon dioxide
The ISME Journal / Jul 28, 2011
He, Z., Piceno, Y., Deng, Y., Xu, M., Lu, Z., DeSantis, T., Andersen, G., Hobbie, S. E., Reich, P. B., & Zhou, J. (2011). The phylogenetic composition and structure of soil microbial communities shifts in response to elevated carbon dioxide. The ISME Journal, 6(2), 259–272. https://doi.org/10.1038/ismej.2011.99
Krti Tallam
PhD Candidate at Stanford University | Computational Biology | Machine Learning
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4 total publications
Modeling epidemics: A primer and Numerus Model Builder implementation
Epidemics / Dec 01, 2018
Getz, W. M., Salter, R., Muellerklein, O., Yoon, H. S., & Tallam, K. (2018). Modeling epidemics: A primer and Numerus Model Builder implementation. Epidemics, 25, 9–19. https://doi.org/10.1016/j.epidem.2018.06.001
Michael W Harman
Distinguished Subject Matter Expert & Leader in Medical Technologies.
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15 total publications
The Hybrid Histidine Kinase Hk1 Is Part of a Two-Component System That Is Essential for Survival of Borrelia burgdorferi in Feeding Ixodes scapularis Ticks
Infection and Immunity / Aug 01, 2011
Caimano, M. J., Kenedy, M. R., Kairu, T., Desrosiers, D. C., Harman, M., Dunham-Ems, S., Akins, D. R., Pal, U., & Radolf, J. D. (2011). The Hybrid Histidine Kinase Hk1 Is Part of a Two-Component System That Is Essential for Survival of Borrelia burgdorferi in Feeding Ixodes scapularis Ticks. Infection and Immunity, 79(8), 3117–3130. https://doi.org/10.1128/iai.05136-11
Dr. Susanne Ressl
Biochemist & Structural Biologist | Project & Team Leader | Creative & Translational Thinker | Problem Solver | Mentor | Educator | Consultant | Innovator | Science Communicator & Writer | Relationship Builder | Collaborator
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Most Relevant Publications (1+)
20 total publications
Delivery of Cardiolipins to the Salmonella Outer Membrane Is Necessary for Survival within Host Tissues and Virulence
Cell Host & Microbe / Apr 01, 2015
Dalebroux, Z. D., Edrozo, M. B., Pfuetzner, R. A., Ressl, S., Kulasekara, B. R., Blanc, M.-P., & Miller, S. I. (2015). Delivery of Cardiolipins to the Salmonella Outer Membrane Is Necessary for Survival within Host Tissues and Virulence. Cell Host & Microbe, 17(4), 441–451. https://doi.org/10.1016/j.chom.2015.03.003
John Joe
Faculty of Health and Medical Sciences, University of Surrey, Guildford, UK
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95 total publications
IS901, a new member of a widespread class of atypical insertion sequences, is associated with pathogenicity inMycobacterium avium
Molecular Microbiology / Sep 01, 1991
Kunze, Z. M., Wall, S., Appelberg, R., Silva, M. T., Portaels, F., & McFadden, J. J. (1991). IS901, a new member of a widespread class of atypical insertion sequences, is associated with pathogenicity inMycobacterium avium. Molecular Microbiology, 5(9), 2265–2272. https://doi.org/10.1111/j.1365-2958.1991.tb02157.x
Carbon flux rerouting during Mycobacterium tuberculosis growth arrest
Molecular Microbiology / Oct 06, 2010
Shi, L., Sohaskey, C. D., Pfeiffer, C., Datta, P., Parks, M., McFadden, J., North, R. J., & Gennaro, M. L. (2010). Carbon flux rerouting during Mycobacterium tuberculosis growth arrest. Molecular Microbiology, 78(5), 1199–1215. https://doi.org/10.1111/j.1365-2958.2010.07399.x
The use of DNA probes identifying restriction-fragment-length polymorphisms to examine the Mycobacterium avium complex
Molecular Microbiology / Jul 01, 1987
McFadden, J. J., Butcher, P. D., Thompson, J., Chiodini, R., & Hermon-Taylor, J. (1987). The use of DNA probes identifying restriction-fragment-length polymorphisms to examine the Mycobacterium avium complex. Molecular Microbiology, 1(1), 283–291. https://doi.org/10.1111/j.1365-2958.1987.tb01934.x
13C Metabolic Flux Analysis Identifies an Unusual Route for Pyruvate Dissimilation in Mycobacteria which Requires Isocitrate Lyase and Carbon Dioxide Fixation
PLoS Pathogens / Jul 21, 2011
Beste, D. J. V., Bonde, B., Hawkins, N., Ward, J. L., Beale, M. H., Noack, S., Nöh, K., Kruger, N. J., Ratcliffe, R. G., & McFadden, J. (2011). 13C Metabolic Flux Analysis Identifies an Unusual Route for Pyruvate Dissimilation in Mycobacteria which Requires Isocitrate Lyase and Carbon Dioxide Fixation. PLoS Pathogens, 7(7), e1002091. https://doi.org/10.1371/journal.ppat.1002091
Mycobacterium tuberculosis strains disrupted in mce3 and mce4 operons are attenuated in mice
Journal of Medical Microbiology / Feb 01, 2008
Senaratne, R. H., Sidders, B., Sequeira, P., Saunders, G., Dunphy, K., Marjanovic, O., Reader, J. R., Lima, P., Chan, S., Kendall, S., McFadden, J., & Riley, L. W. (2008). Mycobacterium tuberculosis strains disrupted in mce3 and mce4 operons are attenuated in mice. Journal of Medical Microbiology, 57(2), 164–170. https://doi.org/10.1099/jmm.0.47454-0
Activity of mycobacterial promoters during intracellular and extracellular growth
Microbiology / Aug 01, 1995
Dellagostin, O. A., Esposito, G., Eales, L.-J., Dale, J. W., & McFadden, J. (1995). Activity of mycobacterial promoters during intracellular and extracellular growth. Microbiology, 141(8), 1785–1792. https://doi.org/10.1099/13500872-141-8-1785
Recombination in mycobacteria
Molecular Microbiology / Jul 01, 1996
McFadden, J. (1996). Recombination in mycobacteria. Molecular Microbiology, 21(2), 205–211. Portico. https://doi.org/10.1046/j.1365-2958.1996.6271345.x
Determination of Genome Size and DNA Homology between an Unclassified Mycobacterium Species Isolated from Patients with Crohn's Disease and Other Mycobacteria
Microbiology / Jan 01, 1987
McFadden, J. J., Butcher, P. D., Chiodini, R. J., & Hermon-Taylor, J. (1987). Determination of Genome Size and DNA Homology between an Unclassified Mycobacterium Species Isolated from Patients with Crohn’s Disease and Other Mycobacteria. Microbiology, 133(1), 211–214. https://doi.org/10.1099/00221287-133-1-211
Compiling a Molecular Inventory for Mycobacterium bovis BCG at Two Growth Rates: Evidence for Growth Rate-Mediated Regulation of Ribosome Biosynthesis and Lipid Metabolism
Journal of Bacteriology / Mar 01, 2005
Beste, D. J. V., Peters, J., Hooper, T., Avignone-Rossa, C., Bushell, M. E., & McFadden, J. (2005). Compiling a Molecular Inventory for Mycobacterium bovis BCG at Two Growth Rates: Evidence for Growth Rate-Mediated Regulation of Ribosome Biosynthesis and Lipid Metabolism. Journal of Bacteriology, 187(5), 1677–1684. https://doi.org/10.1128/jb.187.5.1677-1684.2005
Simple enzymic method for isolation of DNA from diverse bacteria
Journal of Microbiological Methods / Sep 01, 1989
Visuvanathan, S., Moss, M. T., Stanford, J. L., Hermon-Taylor, J., & McFadden, J. J. (1989). Simple enzymic method for isolation of DNA from diverse bacteria. Journal of Microbiological Methods, 10(2), 59–64. https://doi.org/10.1016/0167-7012(89)90001-8
Identification of proteins from tuberculin purified protein derivative (PPD) by LC-MS/MS
Tuberculosis / Nov 01, 2009
Borsuk, S., Newcombe, J., Mendum, T. A., Dellagostin, O. A., & McFadden, J. (2009). Identification of proteins from tuberculin purified protein derivative (PPD) by LC-MS/MS. Tuberculosis, 89(6), 423–430. https://doi.org/10.1016/j.tube.2009.07.003
Gene replacement by homologous recombination in Mycobacterium bovis BCG
Molecular Microbiology / May 01, 1995
Norman, E., Dellagostin, O. A., McFadden, J., & Dale, J. W. (1995). Gene replacement by homologous recombination in Mycobacterium bovis BCG. Molecular Microbiology, 16(4), 755–760. https://doi.org/10.1111/j.1365-2958.1995.tb02436.x
Recombinant Mycobacterium bovis BCG Expressing the Sm14 Antigen of Schistosoma mansoni Protects Mice from Cercarial Challenge
Infection and Immunity / Jun 01, 2004
Varaldo, P. B., Leite, L. C. C., Dias, W. O., Miyaji, E. N., Torres, F. I. G., Gebara, V. C., Armôa, G. R. G., Campos, A. S., Matos, D. C. S., Winter, N., Gicquel, B., Vilar, M. M., McFadden, J., Almeida, M. S., Tendler, M., & McIntosh, D. (2004). Recombinant Mycobacterium bovis BCG Expressing the Sm14 Antigen of Schistosoma mansoni Protects Mice from Cercarial Challenge. Infection and Immunity, 72(6), 3336–3343. https://doi.org/10.1128/iai.72.6.3336-3343.2004
Generation and characterization of a PhoP homologue mutant of Neisseria meningitidis
Molecular Microbiology / Feb 24, 2004
Johnson, C. R., Newcombe, J., Thorne, S., Borde, H. A., Eales-Reynolds, L.-J., Gorringe, A. R., Funnell, S. G. P., & McFadden, J. J. (2004). Generation and characterization of a PhoP homologue mutant of Neisseria meningitidis. Molecular Microbiology, 39(5), 1345–1355. https://doi.org/10.1111/j.1365-2958.2001.02324.x
The Acute-Phase Reactant C-Reactive Protein Binds to Phosphorylcholine-Expressing Neisseria meningitidis and Increases Uptake by Human Phagocytes
Infection and Immunity / Mar 01, 2008
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Transcriptomic Analysis Identifies Growth Rate Modulation as a Component of the Adaptation of Mycobacteria to Survival inside the Macrophage
Journal of Bacteriology / Jun 01, 2007
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Construction and use of integrative vectors to express foreign genes in mycobacteria
Molecular Microbiology / Dec 01, 1993
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IS900-promoted stable integration of a foreign gene into mycobacteria
Molecular Microbiology / Aug 01, 1991
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Infection with an Avirulent phoP Mutant of Neisseria meningitidis Confers Broad Cross-Reactive Immunity
Infection and Immunity / Jan 01, 2004
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Auxotrophic complementation as a selectable marker for stable expression of foreign antigens in Mycobacterium bovis BCG
Tuberculosis / Nov 01, 2007
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Identification and characterization of a novel insertion sequence, IS1106, downstream of the porA gene in B15 Neisseria meningitidis
Molecular Microbiology / Jun 01, 1992
Knight, A. I., Ni, H., Cartwright, K. A. V., & McFadden, J. J. (1992). Identification and characterization of a novel insertion sequence, IS1106, downstream of the porA gene in B15 Neisseria meningitidis. Molecular Microbiology, 6(11), 1565–1573. https://doi.org/10.1111/j.1365-2958.1992.tb00878.x
Context-sensitive transposition of IS6110 in mycobacteria
Microbiology / Nov 01, 1999
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Stimulation of transposition of the Mycobacterium tuberculosis insertion sequence IS6110 by exposure to a microaerobic environment
Molecular Microbiology / Sep 01, 1999
Ghanekar, K., McBride, A., Dellagostin, O., Thorne, S., Mooney, R., & McFadden, J. (1999). Stimulation of transposition of the Mycobacterium tuberculosis insertion sequence IS6110 by exposure to a microaerobic environment. Molecular Microbiology, 33(5), 982–993. https://doi.org/10.1046/j.1365-2958.1999.01539.x
A microfluidic system for long-term time-lapse microscopy studies of mycobacteria
Tuberculosis / Nov 01, 2012
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Naturally occurring insertional inactivation of theporAgene ofNeisseria meningitidisby integration of IS1301
Molecular Microbiology / Oct 01, 1998
Newcombe, J., Cartwright, K., Dyer, S., & McFadden, J. (1998). Naturally occurring insertional inactivation of theporAgene ofNeisseria meningitidisby integration of IS1301. Molecular Microbiology, 30(2), 453–454. https://doi.org/10.1046/j.1365-2958.1998.01056.x
Phenotypic and Transcriptional Characterization of the Meningococcal PhoPQ System, a Magnesium-Sensing Two-Component Regulatory System That Controls Genes Involved in Remodeling the Meningococcal Cell Surface
Journal of Bacteriology / Jul 01, 2005
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Comparative evaluation of Mycobacterium vaccae as a surrogate cloning host for use in the study of mycobacterial genetics
Microbiology / Jul 01, 2002
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Epidemiological and genetic markers, virulence factors and intracellular growth of Mycobacterium avium in AIDS
Research in Microbiology / Jan 01, 1992
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No evidence for antibodies to mycobacterial A60 antigen in Crohn's disease sera by enzyme-linked immunoabsorbent assay (ELISA)
Journal of Medical Microbiology / Apr 01, 1988
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Mycobacteria as possible causes of sarcoidosis and Crohn's disease
Journal of Applied Bacteriology / Dec 01, 1996
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Updating and curating metabolic pathways of TB
Tuberculosis / Jan 01, 2013
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